Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxc9P09633 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Hoxc9P09633 Prss23os-202ENSMUST00000179361 1362 ntBASIC14.52□□□□□ -0.08
Hoxc9P09633 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
Hoxc9P09633 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Hoxc9P09633 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.52□□□□□ -0.08
Hoxc9P09633 Gm13094-201ENSMUST00000117930 409 ntBASIC14.52□□□□□ -0.09
Hoxc9P09633 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Gm25872-201ENSMUST00000177784 100 ntBASIC14.52□□□□□ -0.09
Hoxc9P09633 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.52□□□□□ -0.09
Hoxc9P09633 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC14.52□□□□□ -0.09
Hoxc9P09633 Gm44498-201ENSMUST00000199509 111 ntBASIC14.52□□□□□ -0.09
Hoxc9P09633 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hoxc9P09633 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Hoxc9P09633 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Hoxc9P09633 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Hoxc9P09633 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hoxc9P09633 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hoxc9P09633 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc9P09633 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hoxc9P09633 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.51□□□□□ -0.09
Hoxc9P09633 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm38192-201ENSMUST00000194364 1847 ntBASIC14.51□□□□□ -0.09
Hoxc9P09633 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm43854-201ENSMUST00000200418 394 ntBASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm18001-201ENSMUST00000212023 688 ntBASIC14.51□□□□□ -0.09
Hoxc9P09633 AC156790.2-201ENSMUST00000227115 568 ntBASIC14.51□□□□□ -0.09
Hoxc9P09633 AC121567.1-201ENSMUST00000227213 842 ntBASIC14.51□□□□□ -0.09
Hoxc9P09633 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.51□□□□□ -0.09
Hoxc9P09633 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc9P09633 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC14.5□□□□□ -0.09
Hoxc9P09633 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC14.5□□□□□ -0.09
Hoxc9P09633 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.5□□□□□ -0.09
Hoxc9P09633 Gm42858-201ENSMUST00000202512 1704 ntBASIC14.5□□□□□ -0.09
Hoxc9P09633 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Hoxc9P09633 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Hoxc9P09633 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Gm12947-201ENSMUST00000116114 420 ntBASIC14.5□□□□□ -0.09
Hoxc9P09633 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC14.5□□□□□ -0.09
Hoxc9P09633 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC14.5□□□□□ -0.09
Hoxc9P09633 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Gm44640-201ENSMUST00000206894 247 ntBASIC14.5□□□□□ -0.09
Hoxc9P09633 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC14.5□□□□□ -0.09
Hoxc9P09633 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.5□□□□□ -0.09
Hoxc9P09633 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.5□□□□□ -0.09
Hoxc9P09633 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC14.5□□□□□ -0.09
Hoxc9P09633 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 AC167565.1-201ENSMUST00000226980 1833 ntBASIC14.5□□□□□ -0.09
Hoxc9P09633 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc9P09633 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms