Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL139424.3-202ENST00000641619 917 ntBASIC22.09■■□□□ 1.13
VPS8Q8N3P4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC22.09■■□□□ 1.13
VPS8Q8N3P4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS8Q8N3P4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS8Q8N3P4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS8Q8N3P4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS8Q8N3P4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS8Q8N3P4 AC061965.1-201ENST00000560524 1465 ntBASIC22.09■■□□□ 1.13
VPS8Q8N3P4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS8Q8N3P4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS8Q8N3P4 SALL4P6-201ENST00000429385 1691 ntBASIC22.09■■□□□ 1.13
VPS8Q8N3P4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 GGTLC4P-201ENST00000402176 664 ntBASIC22.08■■□□□ 1.13
VPS8Q8N3P4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 AC135983.4-201ENST00000564116 1262 ntBASIC22.08■■□□□ 1.13
VPS8Q8N3P4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 IL9RP3-201ENST00000442856 1674 ntBASIC22.08■■□□□ 1.13
VPS8Q8N3P4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS8Q8N3P4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
VPS8Q8N3P4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AC005722.1-201ENST00000431878 964 ntBASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 RN7SL767P-201ENST00000493013 295 ntBASIC22.07■■□□□ 1.12
VPS8Q8N3P4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AC132825.4-202ENST00000578792 434 ntBASIC22.07■■□□□ 1.12
VPS8Q8N3P4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 MIR3180-2-201ENST00000581748 88 ntBASIC22.07■■□□□ 1.12
VPS8Q8N3P4 MIR4649-201ENST00000582839 64 ntBASIC22.07■■□□□ 1.12
VPS8Q8N3P4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AC007250.1-201ENST00000608934 338 ntBASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AP003419.4-201ENST00000616071 517 ntBASIC22.07■■□□□ 1.12
VPS8Q8N3P4 GARS-210ENST00000627489 324 ntTSL 4 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 AC092978.1-202ENST00000637590 1327 ntBASIC22.07■■□□□ 1.12
VPS8Q8N3P4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
VPS8Q8N3P4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 AL354861.1-201ENST00000445213 355 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 GRPEL2P1-201ENST00000453145 339 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 AC140113.1-201ENST00000603467 169 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 AGAP10P-201ENST00000454844 2418 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms