Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC009474.1-201ENST00000455096 1565 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 CALY-202ENST00000368555 783 ntTSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AL391647.1-201ENST00000395664 511 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AP000347.1-202ENST00000435868 847 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC245100.3-201ENST00000441281 285 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 GNAQP1-201ENST00000444815 1067 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 MESTP3-201ENST00000503460 968 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC055876.2-201ENST00000531834 546 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC104506.1-201ENST00000609247 429 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 MIR8072-201ENST00000614241 80 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC093028.1-201ENST00000622998 982 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC079781.4-201ENST00000641908 219 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC092053.3-201ENST00000641308 4975 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 AC073957.3-201ENST00000609998 6758 ntBASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.11□□□□□ -0.79
UBE2D4Q9Y2X8 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 MARK2P9-201ENST00000430958 1727 ntBASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 ACKR1-201ENST00000368121 1240 ntBASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 CD81-207ENST00000481687 890 ntTSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC093004.1-201ENST00000508850 424 ntBASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 DUX4L27-201ENST00000554796 1261 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms