Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 AL022313.4-201ENST00000562756 2046 ntBASIC13.97□□□□□ -0.17
VPS33AQ96AX1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AC068760.1-201ENST00000493579 1953 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 FKBP4P6-201ENST00000457486 1332 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 POM121L8P-201ENST00000417732 1281 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 DFFBP1-201ENST00000433250 979 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AC245100.3-201ENST00000441281 285 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 POM121L9P-203ENST00000441984 1285 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AC093433.1-201ENST00000458048 571 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 ENPP7P5-201ENST00000541031 1031 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 CHCHD2P3-201ENST00000603038 451 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AC138466.3-201ENST00000619983 221 ntBASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS33AQ96AX1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS33AQ96AX1 MSTO2P-201ENST00000314835 1709 ntBASIC13.95□□□□□ -0.18
VPS33AQ96AX1 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms