Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 PTP4A1P2-201ENST00000546033 454 ntBASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 AC010319.3-201ENST00000597028 470 ntBASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 MRPL37P1-201ENST00000592451 1337 ntBASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 BAATP1-201ENST00000412284 1225 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 NUTM2HP-201ENST00000442076 2498 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AC012441.1-201ENST00000446669 685 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AGAP10P-201ENST00000454844 2418 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 RN7SL692P-201ENST00000464677 288 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 TDH-203ENST00000531764 1110 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 MIR5189-201ENST00000577370 114 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AL157996.1-201ENST00000624684 2299 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AL358472.5-202ENST00000641448 1267 ntBASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms