Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
RxrbP28704 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.38□□□□□ -0.59
RxrbP28704 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
RxrbP28704 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.38□□□□□ -0.59
RxrbP28704 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RxrbP28704 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.38□□□□□ -0.59
RxrbP28704 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.38□□□□□ -0.59
RxrbP28704 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.38□□□□□ -0.59
RxrbP28704 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.38□□□□□ -0.59
RxrbP28704 Gm43962-201ENSMUST00000203898 190 ntBASIC11.38□□□□□ -0.59
RxrbP28704 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.38□□□□□ -0.59
RxrbP28704 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.38□□□□□ -0.59
RxrbP28704 Gzmn-202ENSMUST00000225535 989 ntBASIC11.38□□□□□ -0.59
RxrbP28704 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
RxrbP28704 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RxrbP28704 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RxrbP28704 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.38□□□□□ -0.59
RxrbP28704 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.38□□□□□ -0.59
RxrbP28704 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.38□□□□□ -0.59
RxrbP28704 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.38□□□□□ -0.59
RxrbP28704 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.38□□□□□ -0.59
RxrbP28704 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RxrbP28704 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
RxrbP28704 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.37□□□□□ -0.59
RxrbP28704 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.37□□□□□ -0.59
RxrbP28704 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.37□□□□□ -0.59
RxrbP28704 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.37□□□□□ -0.59
RxrbP28704 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RxrbP28704 Gm5302-201ENSMUST00000202130 796 ntBASIC11.37□□□□□ -0.59
RxrbP28704 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.37□□□□□ -0.59
RxrbP28704 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.37□□□□□ -0.59
RxrbP28704 Gm13097-201ENSMUST00000210722 397 ntBASIC11.37□□□□□ -0.59
RxrbP28704 Gm45865-201ENSMUST00000211815 945 ntBASIC11.37□□□□□ -0.59
RxrbP28704 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.37□□□□□ -0.59
RxrbP28704 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Gm5705-201ENSMUST00000066241 711 ntBASIC11.37□□□□□ -0.59
RxrbP28704 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.37□□□□□ -0.59
RxrbP28704 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.37□□□□□ -0.59
RxrbP28704 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RxrbP28704 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RxrbP28704 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RxrbP28704 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.36□□□□□ -0.59
RxrbP28704 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RxrbP28704 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RxrbP28704 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RxrbP28704 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms