Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TpbpaP13438 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TpbpaP13438 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.26□□□□□ -0.77
TpbpaP13438 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.25□□□□□ -0.77
TpbpaP13438 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
TpbpaP13438 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Gm11500-201ENSMUST00000118237 601 ntBASIC10.25□□□□□ -0.77
TpbpaP13438 Gm14381-201ENSMUST00000122105 414 ntBASIC10.25□□□□□ -0.77
TpbpaP13438 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.25□□□□□ -0.77
TpbpaP13438 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.25□□□□□ -0.77
TpbpaP13438 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Gm43184-201ENSMUST00000197247 542 ntBASIC10.25□□□□□ -0.77
TpbpaP13438 Gm44364-201ENSMUST00000198368 141 ntBASIC10.25□□□□□ -0.77
TpbpaP13438 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.25□□□□□ -0.77
TpbpaP13438 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
TpbpaP13438 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
TpbpaP13438 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
TpbpaP13438 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.25□□□□□ -0.77
TpbpaP13438 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TpbpaP13438 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
TpbpaP13438 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC10.24□□□□□ -0.77
TpbpaP13438 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
TpbpaP13438 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.24□□□□□ -0.77
TpbpaP13438 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.24□□□□□ -0.77
TpbpaP13438 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
TpbpaP13438 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Gm15276-201ENSMUST00000145953 498 ntBASIC10.24□□□□□ -0.77
TpbpaP13438 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
TpbpaP13438 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.24□□□□□ -0.77
TpbpaP13438 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.24□□□□□ -0.77
TpbpaP13438 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
TpbpaP13438 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
TpbpaP13438 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TpbpaP13438 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.24□□□□□ -0.77
TpbpaP13438 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms