Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.72□□□□□ -0.21
WNT3P56703 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.72□□□□□ -0.21
WNT3P56703 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.72□□□□□ -0.21
WNT3P56703 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.72□□□□□ -0.21
WNT3P56703 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.72□□□□□ -0.21
WNT3P56703 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.72□□□□□ -0.21
WNT3P56703 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.72□□□□□ -0.21
WNT3P56703 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.72□□□□□ -0.21
WNT3P56703 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.72□□□□□ -0.21
WNT3P56703 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.72□□□□□ -0.21
WNT3P56703 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.72□□□□□ -0.21
WNT3P56703 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.72□□□□□ -0.21
WNT3P56703 AL354989.2-201ENST00000435838 1540 ntBASIC13.72□□□□□ -0.21
WNT3P56703 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.72□□□□□ -0.21
WNT3P56703 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
WNT3P56703 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
WNT3P56703 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.72□□□□□ -0.21
WNT3P56703 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.72□□□□□ -0.21
WNT3P56703 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.72□□□□□ -0.21
WNT3P56703 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.72□□□□□ -0.21
WNT3P56703 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.72□□□□□ -0.21
WNT3P56703 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
WNT3P56703 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
WNT3P56703 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 USP17L6P-201ENST00000382470 1197 ntBASIC13.71□□□□□ -0.21
WNT3P56703 BRWD1P1-201ENST00000401091 371 ntBASIC13.71□□□□□ -0.21
WNT3P56703 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 FAM21FP-201ENST00000426241 1131 ntBASIC13.71□□□□□ -0.21
WNT3P56703 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 ACTBP11-201ENST00000436287 1126 ntBASIC13.71□□□□□ -0.21
WNT3P56703 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.71□□□□□ -0.21
WNT3P56703 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.71□□□□□ -0.21
WNT3P56703 ZACNP1-201ENST00000612259 710 ntBASIC13.71□□□□□ -0.21
WNT3P56703 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.71□□□□□ -0.21
WNT3P56703 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.71□□□□□ -0.21
WNT3P56703 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 KRT8P4-201ENST00000509735 1454 ntBASIC13.71□□□□□ -0.21
WNT3P56703 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
WNT3P56703 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
WNT3P56703 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
WNT3P56703 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
WNT3P56703 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
WNT3P56703 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
WNT3P56703 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
WNT3P56703 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms