Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm8459-201ENSMUST00000162504 760 ntBASIC11.03□□□□□ -0.64
Rph3aP47708 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Rph3aP47708 Gm9540-201ENSMUST00000188230 478 ntBASIC11.03□□□□□ -0.64
Rph3aP47708 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rph3aP47708 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.03□□□□□ -0.64
Rph3aP47708 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rph3aP47708 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.03□□□□□ -0.64
Rph3aP47708 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rph3aP47708 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.03□□□□□ -0.64
Rph3aP47708 Gm7340-201ENSMUST00000119729 2752 ntBASIC11.03□□□□□ -0.64
Rph3aP47708 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.03□□□□□ -0.64
Rph3aP47708 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rph3aP47708 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rph3aP47708 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Rph3aP47708 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rph3aP47708 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rph3aP47708 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.02□□□□□ -0.64
Rph3aP47708 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rph3aP47708 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.02□□□□□ -0.64
Rph3aP47708 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Rph3aP47708 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rph3aP47708 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Rph3aP47708 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Gm15595-201ENSMUST00000120840 961 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Mir5120-201ENSMUST00000175020 78 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm43966-201ENSMUST00000203301 612 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.02□□□□□ -0.65
Rph3aP47708 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.02□□□□□ -0.65
Rph3aP47708 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.02□□□□□ -0.65
Rph3aP47708 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.02□□□□□ -0.65
Rph3aP47708 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.02□□□□□ -0.65
Rph3aP47708 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.02□□□□□ -0.65
Rph3aP47708 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.02□□□□□ -0.65
Rph3aP47708 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rph3aP47708 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rph3aP47708 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rph3aP47708 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rph3aP47708 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rph3aP47708 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rph3aP47708 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Rph3aP47708 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rph3aP47708 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms