Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC007969.1-201ENST00000433675 447 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC004898.1-201ENST00000451057 766 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 Z93015.1-201ENST00000451718 390 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 IMP3P2-201ENST00000489760 475 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC036164.1-201ENST00000570544 333 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC244669.2-201ENST00000612320 853 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC111170.3-201ENST00000624282 2464 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC131902.2-201ENST00000566892 2172 ntBASIC15.12■□□□□ 0.01
SRRM3A6NNA2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRRM3A6NNA2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AC019294.4-201ENST00000561777 2905 ntBASIC15.11■□□□□ 0.01
SRRM3A6NNA2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AL591846.1-201ENST00000451736 433 ntBASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 ENPP7P5-201ENST00000541031 1031 ntBASIC15.11■□□□□ 0.01
SRRM3A6NNA2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AL359711.2-201ENST00000563105 872 ntBASIC15.11■□□□□ 0.01
SRRM3A6NNA2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 HLA-C-210ENST00000640219 976 ntBASIC15.11■□□□□ 0.01
SRRM3A6NNA2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AL139385.1-201ENST00000611744 3272 ntBASIC15.11■□□□□ 0.01
SRRM3A6NNA2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 RN7SL832P-201ENST00000607781 1756 ntBASIC15.11■□□□□ 0.01
SRRM3A6NNA2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms