Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.13■■□□□ 1.45
Pcdhb5Q91XZ5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb5Q91XZ5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb5Q91XZ5 Gm43060-201ENSMUST00000200621 289 ntBASIC24.13■■□□□ 1.45
Pcdhb5Q91XZ5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.13■■□□□ 1.45
Pcdhb5Q91XZ5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
Pcdhb5Q91XZ5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.12■■□□□ 1.45
Pcdhb5Q91XZ5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb5Q91XZ5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb5Q91XZ5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
Pcdhb5Q91XZ5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.12■■□□□ 1.45
Pcdhb5Q91XZ5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb5Q91XZ5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Pcdhb5Q91XZ5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb5Q91XZ5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb5Q91XZ5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb5Q91XZ5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.11■■□□□ 1.45
Pcdhb5Q91XZ5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.11■■□□□ 1.45
Pcdhb5Q91XZ5 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.11■■□□□ 1.45
Pcdhb5Q91XZ5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb5Q91XZ5 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.11■■□□□ 1.45
Pcdhb5Q91XZ5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Pcdhb5Q91XZ5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb5Q91XZ5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb5Q91XZ5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb5Q91XZ5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
Pcdhb5Q91XZ5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.1■■□□□ 1.45
Pcdhb5Q91XZ5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb5Q91XZ5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb5Q91XZ5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb5Q91XZ5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhb5Q91XZ5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhb5Q91XZ5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.08■■□□□ 1.45
Pcdhb5Q91XZ5 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.08■■□□□ 1.45
Pcdhb5Q91XZ5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb5Q91XZ5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb5Q91XZ5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb5Q91XZ5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb5Q91XZ5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb5Q91XZ5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhb5Q91XZ5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhb5Q91XZ5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhb5Q91XZ5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb5Q91XZ5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb5Q91XZ5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb5Q91XZ5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb5Q91XZ5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb5Q91XZ5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb5Q91XZ5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb5Q91XZ5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb5Q91XZ5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb5Q91XZ5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb5Q91XZ5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Pcdhb5Q91XZ5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb5Q91XZ5 Gm40848-201ENSMUST00000221998 324 ntBASIC24.06■■□□□ 1.44
Pcdhb5Q91XZ5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb5Q91XZ5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb5Q91XZ5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb5Q91XZ5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb5Q91XZ5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb5Q91XZ5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Pcdhb5Q91XZ5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 Smad6-203ENSMUST00000179458 273 ntBASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 Gm10493-201ENSMUST00000097270 612 ntBASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb5Q91XZ5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.03■■□□□ 1.44
Pcdhb5Q91XZ5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb5Q91XZ5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb5Q91XZ5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.01■■□□□ 1.43
Pcdhb5Q91XZ5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb5Q91XZ5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.01■■□□□ 1.43
Pcdhb5Q91XZ5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb5Q91XZ5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb5Q91XZ5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb5Q91XZ5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb5Q91XZ5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms