Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Csnka2ipQ8CH19 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Gm45417-201ENSMUST00000209533 758 ntBASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Gm7143-201ENSMUST00000222811 859 ntBASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Csnka2ipQ8CH19 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Csnka2ipQ8CH19 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Csnka2ipQ8CH19 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Csnka2ipQ8CH19 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.15■□□□□ 0.66
Csnka2ipQ8CH19 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Csnka2ipQ8CH19 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Csnka2ipQ8CH19 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Csnka2ipQ8CH19 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Csnka2ipQ8CH19 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Csnka2ipQ8CH19 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Csnka2ipQ8CH19 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Csnka2ipQ8CH19 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Csnka2ipQ8CH19 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Csnka2ipQ8CH19 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 Gm12821-201ENSMUST00000120022 600 ntBASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Csnka2ipQ8CH19 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Csnka2ipQ8CH19 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Csnka2ipQ8CH19 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.12■□□□□ 0.65
Csnka2ipQ8CH19 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Csnka2ipQ8CH19 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Csnka2ipQ8CH19 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Csnka2ipQ8CH19 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Csnka2ipQ8CH19 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Csnka2ipQ8CH19 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Csnka2ipQ8CH19 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Csnka2ipQ8CH19 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Csnka2ipQ8CH19 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Csnka2ipQ8CH19 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Csnka2ipQ8CH19 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Csnka2ipQ8CH19 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Csnka2ipQ8CH19 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Csnka2ipQ8CH19 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Csnka2ipQ8CH19 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Csnka2ipQ8CH19 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Csnka2ipQ8CH19 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms