Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smco1Q8CEZ1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smco1Q8CEZ1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.55■□□□□ 0.56
Smco1Q8CEZ1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smco1Q8CEZ1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smco1Q8CEZ1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.53■□□□□ 0.56
Smco1Q8CEZ1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smco1Q8CEZ1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Smco1Q8CEZ1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Smco1Q8CEZ1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.51■□□□□ 0.55
Smco1Q8CEZ1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smco1Q8CEZ1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco1Q8CEZ1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco1Q8CEZ1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco1Q8CEZ1 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.49■□□□□ 0.55
Smco1Q8CEZ1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco1Q8CEZ1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco1Q8CEZ1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco1Q8CEZ1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smco1Q8CEZ1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smco1Q8CEZ1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.48■□□□□ 0.55
Smco1Q8CEZ1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smco1Q8CEZ1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smco1Q8CEZ1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smco1Q8CEZ1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smco1Q8CEZ1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.47■□□□□ 0.55
Smco1Q8CEZ1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smco1Q8CEZ1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smco1Q8CEZ1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smco1Q8CEZ1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.46■□□□□ 0.55
Smco1Q8CEZ1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smco1Q8CEZ1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smco1Q8CEZ1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.45■□□□□ 0.54
Smco1Q8CEZ1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco1Q8CEZ1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco1Q8CEZ1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smco1Q8CEZ1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smco1Q8CEZ1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco1Q8CEZ1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.45■□□□□ 0.54
Smco1Q8CEZ1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms