Protein–RNA interactions for Protein: Q8CAE3

Kcnmb1, Calcium-activated potassium channel subunit beta-1, mousemouse

Predictions only

Length 191 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnmb1Q8CAE3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnmb1Q8CAE3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnmb1Q8CAE3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.77■□□□□ 0.6
Kcnmb1Q8CAE3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnmb1Q8CAE3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnmb1Q8CAE3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnmb1Q8CAE3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Kcnmb1Q8CAE3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnmb1Q8CAE3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Gm10399-202ENSMUST00000202768 748 ntBASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnmb1Q8CAE3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnmb1Q8CAE3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnmb1Q8CAE3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.74■□□□□ 0.59
Kcnmb1Q8CAE3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Kcnmb1Q8CAE3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnmb1Q8CAE3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnmb1Q8CAE3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.74■□□□□ 0.59
Kcnmb1Q8CAE3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Gm10232-201ENSMUST00000089221 720 ntBASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnmb1Q8CAE3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnmb1Q8CAE3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnmb1Q8CAE3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnmb1Q8CAE3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnmb1Q8CAE3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnmb1Q8CAE3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnmb1Q8CAE3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.71■□□□□ 0.59
Kcnmb1Q8CAE3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.71■□□□□ 0.58
Kcnmb1Q8CAE3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Kcnmb1Q8CAE3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnmb1Q8CAE3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnmb1Q8CAE3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnmb1Q8CAE3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms