Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cachd1Q6PDJ1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cachd1Q6PDJ1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cachd1Q6PDJ1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cachd1Q6PDJ1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Smad6-203ENSMUST00000179458 273 ntBASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cachd1Q6PDJ1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cachd1Q6PDJ1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cachd1Q6PDJ1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cachd1Q6PDJ1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cachd1Q6PDJ1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.87
Cachd1Q6PDJ1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms