Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Foxc1Q61572 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.78□□□□□ -0.04
Foxc1Q61572 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Foxc1Q61572 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Foxc1Q61572 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Foxc1Q61572 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Foxc1Q61572 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxc1Q61572 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Foxc1Q61572 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxc1Q61572 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.77□□□□□ -0.05
Foxc1Q61572 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxc1Q61572 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxc1Q61572 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Foxc1Q61572 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.76□□□□□ -0.05
Foxc1Q61572 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxc1Q61572 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxc1Q61572 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Foxc1Q61572 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Foxc1Q61572 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.76□□□□□ -0.05
Foxc1Q61572 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Foxc1Q61572 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxc1Q61572 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxc1Q61572 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxc1Q61572 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxc1Q61572 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxc1Q61572 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxc1Q61572 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.75□□□□□ -0.05
Foxc1Q61572 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Foxc1Q61572 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Foxc1Q61572 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.75□□□□□ -0.05
Foxc1Q61572 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.75□□□□□ -0.05
Foxc1Q61572 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxc1Q61572 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Foxc1Q61572 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Foxc1Q61572 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxc1Q61572 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Iqck-206ENSMUST00000208658 2891 ntBASIC14.73□□□□□ -0.05
Foxc1Q61572 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.73□□□□□ -0.05
Foxc1Q61572 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
Foxc1Q61572 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.73□□□□□ -0.05
Foxc1Q61572 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Foxc1Q61572 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Foxc1Q61572 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Foxc1Q61572 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Foxc1Q61572 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxc1Q61572 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.72□□□□□ -0.05
Foxc1Q61572 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxc1Q61572 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxc1Q61572 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxc1Q61572 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxc1Q61572 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxc1Q61572 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Foxc1Q61572 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.71□□□□□ -0.05
Foxc1Q61572 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxc1Q61572 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Foxc1Q61572 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.71□□□□□ -0.06
Foxc1Q61572 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Foxc1Q61572 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Foxc1Q61572 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.7□□□□□ -0.06
Foxc1Q61572 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.7□□□□□ -0.06
Foxc1Q61572 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Foxc1Q61572 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.7□□□□□ -0.06
Foxc1Q61572 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms