Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Mir7075-201ENSMUST00000184187 82 ntBASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc28Q3TX51 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Lrrc28Q3TX51 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc28Q3TX51 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc28Q3TX51 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc28Q3TX51 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.27■□□□□ 0.68
Lrrc28Q3TX51 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Lrrc28Q3TX51 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lrrc28Q3TX51 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lrrc28Q3TX51 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lrrc28Q3TX51 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc28Q3TX51 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc28Q3TX51 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc28Q3TX51 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Lrrc28Q3TX51 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.22■□□□□ 0.67
Lrrc28Q3TX51 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc28Q3TX51 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc28Q3TX51 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc28Q3TX51 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrc28Q3TX51 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Gm8493-201ENSMUST00000196881 489 ntBASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.2■□□□□ 0.66
Lrrc28Q3TX51 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms