Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 RRT7YLL030C 342 nt5.5□□□□□ -1.53
RPN11P43588 YOR131CYOR131C 657 nt5.5□□□□□ -1.53
RPN11P43588 RPO26YPR187W 468 nt5.5□□□□□ -1.53
RPN11P43588 KRE29YER038C 1395 nt5.5□□□□□ -1.53
RPN11P43588 RSA4YCR072C 1548 nt5.49□□□□□ -1.53
RPN11P43588 RTC5YOR118W 1704 nt5.49□□□□□ -1.53
RPN11P43588 KAR2YJL034W 2049 nt5.49□□□□□ -1.53
RPN11P43588 SNA2YDR525W-A 240 nt5.49□□□□□ -1.53
RPN11P43588 ARC1YGL105W 1131 nt5.49□□□□□ -1.53
RPN11P43588 DAN1YJR150C 897 nt5.49□□□□□ -1.53
RPN11P43588 YOL035CYOL035C 303 nt5.49□□□□□ -1.53
RPN11P43588 APC1YNL172W 5247 nt5.49□□□□□ -1.53
RPN11P43588 ISR1YPR106W 1332 nt5.48□□□□□ -1.53
RPN11P43588 ARP10YDR106W 855 nt5.48□□□□□ -1.53
RPN11P43588 API2YDR525W 330 nt5.48□□□□□ -1.53
RPN11P43588 MBR1YKL093W 1020 nt5.48□□□□□ -1.53
RPN11P43588 MCM1YMR043W 861 nt5.48□□□□□ -1.53
RPN11P43588 KGD1YIL125W 3045 nt5.48□□□□□ -1.53
RPN11P43588 SSB2YNL209W 1842 nt5.48□□□□□ -1.53
RPN11P43588 ROT2YBR229C 2865 nt5.48□□□□□ -1.53
RPN11P43588 SRP101YDR292C 1866 nt5.47□□□□□ -1.53
RPN11P43588 RAM1YDL090C 1296 nt5.47□□□□□ -1.53
RPN11P43588 PEX12YMR026C 1200 nt5.47□□□□□ -1.53
RPN11P43588 DOM34YNL001W 1161 nt5.47□□□□□ -1.53
RPN11P43588 RPC19YNL113W 429 nt5.47□□□□□ -1.53
RPN11P43588 ALT2YDR111C 1524 nt5.47□□□□□ -1.53
RPN11P43588 MAL11YGR289C 1851 nt5.47□□□□□ -1.53
RPN11P43588 AIP1YMR092C 1848 nt5.46□□□□□ -1.53
RPN11P43588 MMR1YLR190W 1476 nt5.46□□□□□ -1.53
RPN11P43588 IMG2YCR071C 441 nt5.46□□□□□ -1.54
RPN11P43588 ARG82YDR173C 1068 nt5.46□□□□□ -1.54
RPN11P43588 UPS3YDR185C 540 nt5.46□□□□□ -1.54
RPN11P43588 HPM1YIL110W 1134 nt5.46□□□□□ -1.54
RPN11P43588 DUG1YFR044C 1446 nt5.46□□□□□ -1.54
RPN11P43588 CLD1YGR110W 1338 nt5.46□□□□□ -1.54
RPN11P43588 FLC1YPL221W 2382 nt5.45□□□□□ -1.54
RPN11P43588 GLT1YDL171C 6438 nt5.45□□□□□ -1.54
RPN11P43588 GCN20YFR009W 2259 nt5.45□□□□□ -1.54
RPN11P43588 PCT1YGR202C 1275 nt5.45□□□□□ -1.54
RPN11P43588 YML131WYML131W 1098 nt5.45□□□□□ -1.54
RPN11P43588 RFA1YAR007C 1866 nt5.45□□□□□ -1.54
RPN11P43588 TFG1YGR186W 2208 nt5.44□□□□□ -1.54
RPN11P43588 AVO1YOL078W 3531 nt5.44□□□□□ -1.54
RPN11P43588 GCR1YPL075W 2358 nt5.44□□□□□ -1.54
RPN11P43588 FLO8YER109C 2400 nt5.44□□□□□ -1.54
RPN11P43588 MRPL25YGR076C 474 nt5.44□□□□□ -1.54
RPN11P43588 NKP2YLR315W 462 nt5.44□□□□□ -1.54
RPN11P43588 IMD3YLR432W 1572 nt5.44□□□□□ -1.54
RPN11P43588 NDJ1YOL104C 1059 nt5.44□□□□□ -1.54
RPN11P43588 ASN1YPR145W 1719 nt5.44□□□□□ -1.54
RPN11P43588 ATG26YLR189C 3597 nt5.44□□□□□ -1.54
RPN11P43588 SAS4YDR181C 1446 nt5.43□□□□□ -1.54
RPN11P43588 YGL072CYGL072C 360 nt5.43□□□□□ -1.54
RPN11P43588 SPC24YMR117C 642 nt5.43□□□□□ -1.54
RPN11P43588 YPR109WYPR109W 885 nt5.43□□□□□ -1.54
RPN11P43588 MCM2YBL023C 2607 nt5.43□□□□□ -1.54
RPN11P43588 PGM2YMR105C 1710 nt5.43□□□□□ -1.54
RPN11P43588 MST1YKL194C 1389 nt5.42□□□□□ -1.54
RPN11P43588 MPC54YOR177C 1395 nt5.42□□□□□ -1.54
RPN11P43588 EMW1YNL313C 2715 nt5.42□□□□□ -1.54
RPN11P43588 AAD6YFL056C 639 nt5.42□□□□□ -1.54
RPN11P43588 YGL214WYGL214W 486 nt5.42□□□□□ -1.54
RPN11P43588 YHR095WYHR095W 495 nt5.42□□□□□ -1.54
RPN11P43588 AIM26YKL037W 357 nt5.42□□□□□ -1.54
RPN11P43588 YMR114CYMR114C 1107 nt5.42□□□□□ -1.54
RPN11P43588 YPL014WYPL014W 1146 nt5.42□□□□□ -1.54
RPN11P43588 PCS60YBR222C 1632 nt5.41□□□□□ -1.54
RPN11P43588 URA7YBL039C 1740 nt5.41□□□□□ -1.54
RPN11P43588 RPS14AYCR031C 414 nt5.41□□□□□ -1.54
RPN11P43588 GCV1YDR019C 1203 nt5.41□□□□□ -1.54
RPN11P43588 tC(GCA)BtC(GCA)B 72 nt5.41□□□□□ -1.54
RPN11P43588 tC(GCA)GtC(GCA)G 72 nt5.41□□□□□ -1.54
RPN11P43588 tC(GCA)P1tC(GCA)P1 72 nt5.41□□□□□ -1.54
RPN11P43588 tC(GCA)P2tC(GCA)P2 72 nt5.41□□□□□ -1.54
RPN11P43588 RTN1YDR233C 888 nt5.41□□□□□ -1.54
RPN11P43588 YKR073CYKR073C 321 nt5.41□□□□□ -1.54
RPN11P43588 YLL017WYLL017W 312 nt5.41□□□□□ -1.54
RPN11P43588 CTR3YLR411W 726 nt5.41□□□□□ -1.54
RPN11P43588 SYG1YIL047C 2709 nt5.4□□□□□ -1.54
RPN11P43588 RCK2YLR248W 1833 nt5.4□□□□□ -1.54
RPN11P43588 OTU1YFL044C 906 nt5.4□□□□□ -1.54
RPN11P43588 YGR127WYGR127W 939 nt5.4□□□□□ -1.54
RPN11P43588 EPS1YIL005W 2106 nt5.4□□□□□ -1.54
RPN11P43588 YJR112W-AYJR112W-A 330 nt5.4□□□□□ -1.54
RPN11P43588 SEC39YLR440C 2130 nt5.4□□□□□ -1.54
RPN11P43588 YNL234WYNL234W 1281 nt5.4□□□□□ -1.54
RPN11P43588 ATG32YIL146C 1590 nt5.4□□□□□ -1.55
RPN11P43588 SSL1YLR005W 1386 nt5.4□□□□□ -1.55
RPN11P43588 POP1YNL221C 2628 nt5.4□□□□□ -1.55
RPN11P43588 RRB1YMR131C 1536 nt5.39□□□□□ -1.55
RPN11P43588 ALD6YPL061W 1503 nt5.39□□□□□ -1.55
RPN11P43588 DUR1,2YBR208C 5508 nt5.39□□□□□ -1.55
RPN11P43588 YDR246W-AYDR246W-A 201 nt5.39□□□□□ -1.55
RPN11P43588 YIL152WYIL152W 708 nt5.39□□□□□ -1.55
RPN11P43588 YJR038CYJR038C 363 nt5.39□□□□□ -1.55
RPN11P43588 YDC1YPL087W 954 nt5.39□□□□□ -1.55
RPN11P43588 SPO19YPL130W 672 nt5.39□□□□□ -1.55
RPN11P43588 SFB3YHR098C 2790 nt5.39□□□□□ -1.55
RPN11P43588 MET17YLR303W 1335 nt5.39□□□□□ -1.55
RPN11P43588 RVB1YDR190C 1392 nt5.39□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms