Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC34.53■■■■□ 3.12
KDM5CP41229 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
KDM5CP41229 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
KDM5CP41229 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
KDM5CP41229 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC34.53■■■■□ 3.12
KDM5CP41229 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
KDM5CP41229 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
KDM5CP41229 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
KDM5CP41229 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
KDM5CP41229 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC34.52■■■■□ 3.12
KDM5CP41229 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC34.52■■■■□ 3.12
KDM5CP41229 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
KDM5CP41229 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
KDM5CP41229 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
KDM5CP41229 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC34.52■■■■□ 3.12
KDM5CP41229 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC34.52■■■■□ 3.12
KDM5CP41229 CCDC92B-201ENST00000575506 885 ntBASIC34.52■■■■□ 3.12
KDM5CP41229 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
KDM5CP41229 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC34.52■■■■□ 3.12
KDM5CP41229 NME4-202ENST00000382940 766 ntTSL 3 BASIC34.51■■■■□ 3.12
KDM5CP41229 AC126544.1-201ENST00000580842 1059 ntBASIC34.51■■■■□ 3.12
KDM5CP41229 NME4-211ENST00000620944 1193 ntTSL 2 BASIC34.51■■■■□ 3.12
KDM5CP41229 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC34.51■■■■□ 3.11
KDM5CP41229 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
KDM5CP41229 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC34.51■■■■□ 3.11
KDM5CP41229 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
KDM5CP41229 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC34.5■■■■□ 3.11
KDM5CP41229 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC34.5■■■■□ 3.11
KDM5CP41229 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC34.5■■■■□ 3.11
KDM5CP41229 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC34.49■■■■□ 3.11
KDM5CP41229 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.11
KDM5CP41229 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
KDM5CP41229 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
KDM5CP41229 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
KDM5CP41229 TERF1P2-201ENST00000583350 1212 ntBASIC34.49■■■■□ 3.11
KDM5CP41229 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC34.48■■■■□ 3.11
KDM5CP41229 CD37-213ENST00000598095 1598 ntTSL 2 BASIC34.48■■■■□ 3.11
KDM5CP41229 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC34.48■■■■□ 3.11
KDM5CP41229 MIR572-201ENST00000384983 95 ntBASIC34.48■■■■□ 3.11
KDM5CP41229 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC34.48■■■■□ 3.11
KDM5CP41229 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC34.48■■■■□ 3.11
KDM5CP41229 MIR6084-201ENST00000622012 110 ntBASIC34.48■■■■□ 3.11
KDM5CP41229 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
KDM5CP41229 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC34.48■■■■□ 3.11
KDM5CP41229 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
KDM5CP41229 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
KDM5CP41229 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC34.47■■■■□ 3.11
KDM5CP41229 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC34.47■■■■□ 3.11
KDM5CP41229 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC34.47■■■■□ 3.11
KDM5CP41229 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC34.47■■■■□ 3.11
KDM5CP41229 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC34.47■■■■□ 3.11
KDM5CP41229 AL022069.1-201ENST00000568025 1636 ntBASIC34.46■■■■□ 3.11
KDM5CP41229 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
KDM5CP41229 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC34.46■■■■□ 3.11
KDM5CP41229 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
KDM5CP41229 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC34.46■■■■□ 3.11
KDM5CP41229 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
KDM5CP41229 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
KDM5CP41229 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC34.45■■■■□ 3.11
KDM5CP41229 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
KDM5CP41229 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC34.45■■■■□ 3.1
KDM5CP41229 AL354811.1-201ENST00000610286 706 ntBASIC34.45■■■■□ 3.1
KDM5CP41229 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
KDM5CP41229 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
KDM5CP41229 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC34.44■■■■□ 3.1
KDM5CP41229 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
KDM5CP41229 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC34.44■■■■□ 3.1
KDM5CP41229 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
KDM5CP41229 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC34.44■■■■□ 3.1
KDM5CP41229 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
KDM5CP41229 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
KDM5CP41229 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
KDM5CP41229 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC34.43■■■■□ 3.1
KDM5CP41229 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC34.42■■■■□ 3.1
KDM5CP41229 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
KDM5CP41229 KRT18P14-201ENST00000534205 1250 ntBASIC34.42■■■■□ 3.1
KDM5CP41229 pRNA.6-201ENST00000610482 90 ntBASIC34.42■■■■□ 3.1
KDM5CP41229 pRNA.5-201ENST00000612139 90 ntBASIC34.42■■■■□ 3.1
KDM5CP41229 pRNA.11-201ENST00000618423 90 ntBASIC34.42■■■■□ 3.1
KDM5CP41229 pRNA.13-201ENST00000619112 90 ntBASIC34.42■■■■□ 3.1
KDM5CP41229 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC34.42■■■■□ 3.1
KDM5CP41229 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
KDM5CP41229 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
KDM5CP41229 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC34.42■■■■□ 3.1
KDM5CP41229 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
KDM5CP41229 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC34.41■■■■□ 3.1
KDM5CP41229 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC34.41■■■■□ 3.1
KDM5CP41229 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
KDM5CP41229 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
KDM5CP41229 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
KDM5CP41229 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC34.4■■■■□ 3.1
KDM5CP41229 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC34.4■■■■□ 3.1
KDM5CP41229 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC34.4■■■■□ 3.1
KDM5CP41229 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
KDM5CP41229 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC34.4■■■■□ 3.1
KDM5CP41229 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC34.4■■■■□ 3.1
KDM5CP41229 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC34.39■■■■□ 3.1
KDM5CP41229 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC34.39■■■■□ 3.1
KDM5CP41229 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC34.39■■■■□ 3.1
KDM5CP41229 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC34.39■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms