Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Gm40881-201ENSMUST00000223397 166 ntBASIC16.69■□□□□ 0.26
Hes1P35428 Rps24-207ENSMUST00000224568 714 ntBASIC16.69■□□□□ 0.26
Hes1P35428 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hes1P35428 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hes1P35428 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hes1P35428 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hes1P35428 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.68■□□□□ 0.26
Hes1P35428 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.68■□□□□ 0.26
Hes1P35428 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hes1P35428 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hes1P35428 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hes1P35428 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hes1P35428 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hes1P35428 Gm7417-201ENSMUST00000192950 473 ntBASIC16.67■□□□□ 0.26
Hes1P35428 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.67■□□□□ 0.26
Hes1P35428 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hes1P35428 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hes1P35428 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hes1P35428 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hes1P35428 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Hes1P35428 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hes1P35428 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.66■□□□□ 0.26
Hes1P35428 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hes1P35428 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hes1P35428 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hes1P35428 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hes1P35428 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hes1P35428 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hes1P35428 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hes1P35428 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.65■□□□□ 0.26
Hes1P35428 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hes1P35428 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.65■□□□□ 0.26
Hes1P35428 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hes1P35428 Gm9959-201ENSMUST00000068277 390 ntBASIC16.65■□□□□ 0.26
Hes1P35428 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hes1P35428 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Hes1P35428 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hes1P35428 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hes1P35428 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Hes1P35428 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hes1P35428 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.64■□□□□ 0.25
Hes1P35428 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hes1P35428 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hes1P35428 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hes1P35428 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hes1P35428 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hes1P35428 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hes1P35428 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hes1P35428 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.63■□□□□ 0.25
Hes1P35428 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hes1P35428 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hes1P35428 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hes1P35428 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hes1P35428 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.62■□□□□ 0.25
Hes1P35428 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.62■□□□□ 0.25
Hes1P35428 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.62■□□□□ 0.25
Hes1P35428 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hes1P35428 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hes1P35428 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hes1P35428 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hes1P35428 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hes1P35428 Gm14117-201ENSMUST00000122417 843 ntBASIC16.61■□□□□ 0.25
Hes1P35428 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hes1P35428 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hes1P35428 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.61■□□□□ 0.25
Hes1P35428 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.61■□□□□ 0.25
Hes1P35428 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.61■□□□□ 0.25
Hes1P35428 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hes1P35428 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hes1P35428 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms