Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn2O88552 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn2O88552 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.84■□□□□ 0.93
Cldn2O88552 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn2O88552 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cldn2O88552 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Cldn2O88552 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn2O88552 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.83■□□□□ 0.93
Cldn2O88552 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cldn2O88552 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn2O88552 Gm26833-201ENSMUST00000180899 440 ntBASIC20.83■□□□□ 0.93
Cldn2O88552 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
Cldn2O88552 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn2O88552 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.83■□□□□ 0.92
Cldn2O88552 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn2O88552 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
Cldn2O88552 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn2O88552 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn2O88552 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.82■□□□□ 0.92
Cldn2O88552 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn2O88552 Gm40848-201ENSMUST00000221998 324 ntBASIC20.82■□□□□ 0.92
Cldn2O88552 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn2O88552 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Cldn2O88552 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn2O88552 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn2O88552 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn2O88552 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn2O88552 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn2O88552 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn2O88552 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn2O88552 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn2O88552 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cldn2O88552 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn2O88552 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn2O88552 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Cldn2O88552 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn2O88552 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn2O88552 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn2O88552 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
Cldn2O88552 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Cldn2O88552 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.79■□□□□ 0.92
Cldn2O88552 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.79■□□□□ 0.92
Cldn2O88552 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.79■□□□□ 0.92
Cldn2O88552 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn2O88552 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn2O88552 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn2O88552 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn2O88552 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cldn2O88552 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.78■□□□□ 0.92
Cldn2O88552 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn2O88552 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn2O88552 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn2O88552 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.78■□□□□ 0.92
Cldn2O88552 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn2O88552 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn2O88552 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn2O88552 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn2O88552 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn2O88552 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.77■□□□□ 0.92
Cldn2O88552 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.77■□□□□ 0.91
Cldn2O88552 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Cldn2O88552 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn2O88552 Gm29257-201ENSMUST00000186115 639 ntBASIC20.76■□□□□ 0.91
Cldn2O88552 Gm43060-201ENSMUST00000200621 289 ntBASIC20.76■□□□□ 0.91
Cldn2O88552 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn2O88552 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.76■□□□□ 0.91
Cldn2O88552 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn2O88552 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn2O88552 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn2O88552 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn2O88552 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn2O88552 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn2O88552 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn2O88552 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn2O88552 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn2O88552 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn2O88552 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn2O88552 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn2O88552 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn2O88552 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn2O88552 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.74■□□□□ 0.91
Cldn2O88552 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn2O88552 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn2O88552 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn2O88552 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn2O88552 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn2O88552 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn2O88552 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cldn2O88552 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.73■□□□□ 0.91
Cldn2O88552 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn2O88552 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn2O88552 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn2O88552 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn2O88552 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn2O88552 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn2O88552 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn2O88552 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn2O88552 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn2O88552 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Cldn2O88552 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms