Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TRAFD1O14545 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
TRAFD1O14545 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRAFD1O14545 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.22■■□□□ 1.31
TRAFD1O14545 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
TRAFD1O14545 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.22■■□□□ 1.31
TRAFD1O14545 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRAFD1O14545 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRAFD1O14545 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRAFD1O14545 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRAFD1O14545 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRAFD1O14545 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TRAFD1O14545 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TRAFD1O14545 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRAFD1O14545 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TRAFD1O14545 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.21■■□□□ 1.31
TRAFD1O14545 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRAFD1O14545 AL022069.1-201ENST00000568025 1636 ntBASIC23.21■■□□□ 1.31
TRAFD1O14545 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRAFD1O14545 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.21■■□□□ 1.31
TRAFD1O14545 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRAFD1O14545 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRAFD1O14545 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAFD1O14545 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.2■■□□□ 1.3
TRAFD1O14545 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAFD1O14545 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRAFD1O14545 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.2■■□□□ 1.3
TRAFD1O14545 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAFD1O14545 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAFD1O14545 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAFD1O14545 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.2■■□□□ 1.3
TRAFD1O14545 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.2■■□□□ 1.3
TRAFD1O14545 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.2■■□□□ 1.3
TRAFD1O14545 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRAFD1O14545 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAFD1O14545 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TRAFD1O14545 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TRAFD1O14545 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAFD1O14545 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRAFD1O14545 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAFD1O14545 AL356441.2-201ENST00000443009 864 ntBASIC23.19■■□□□ 1.3
TRAFD1O14545 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.19■■□□□ 1.3
TRAFD1O14545 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TRAFD1O14545 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.19■■□□□ 1.3
TRAFD1O14545 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.19■■□□□ 1.3
TRAFD1O14545 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAFD1O14545 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.19■■□□□ 1.3
TRAFD1O14545 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAFD1O14545 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRAFD1O14545 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAFD1O14545 AL161729.1-201ENST00000604104 1402 ntBASIC23.18■■□□□ 1.3
TRAFD1O14545 MIR6722-201ENST00000617286 78 ntBASIC23.18■■□□□ 1.3
TRAFD1O14545 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.18■■□□□ 1.3
TRAFD1O14545 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.18■■□□□ 1.3
TRAFD1O14545 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TRAFD1O14545 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAFD1O14545 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAFD1O14545 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.18■■□□□ 1.3
TRAFD1O14545 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAFD1O14545 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAFD1O14545 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TRAFD1O14545 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAFD1O14545 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAFD1O14545 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.17■■□□□ 1.3
TRAFD1O14545 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
TRAFD1O14545 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TRAFD1O14545 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.17■■□□□ 1.3
TRAFD1O14545 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAFD1O14545 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.17■■□□□ 1.3
TRAFD1O14545 AC010997.5-201ENST00000609182 354 ntBASIC23.17■■□□□ 1.3
TRAFD1O14545 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.17■■□□□ 1.3
TRAFD1O14545 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAFD1O14545 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAFD1O14545 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.17■■□□□ 1.3
TRAFD1O14545 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAFD1O14545 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAFD1O14545 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAFD1O14545 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAFD1O14545 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.16■■□□□ 1.3
TRAFD1O14545 MTDHP2-201ENST00000601468 714 ntBASIC23.16■■□□□ 1.3
TRAFD1O14545 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.16■■□□□ 1.3
TRAFD1O14545 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAFD1O14545 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRAFD1O14545 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TRAFD1O14545 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TRAFD1O14545 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRAFD1O14545 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRAFD1O14545 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAFD1O14545 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.15■■□□□ 1.3
TRAFD1O14545 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAFD1O14545 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TRAFD1O14545 KRT16P3-201ENST00000439127 1283 ntBASIC23.15■■□□□ 1.3
TRAFD1O14545 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.15■■□□□ 1.3
TRAFD1O14545 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAFD1O14545 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRAFD1O14545 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.14■■□□□ 1.3
TRAFD1O14545 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.14■■□□□ 1.29
TRAFD1O14545 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRAFD1O14545 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.14■■□□□ 1.29
TRAFD1O14545 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms