Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv3-3A0A140T8Q0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv3-3A0A140T8Q0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Gm12818-201ENSMUST00000117562 1349 ntBASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv3-3A0A140T8Q0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Gm11599-201ENSMUST00000118720 878 ntBASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv3-3A0A140T8Q0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv3-3A0A140T8Q0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv3-3A0A140T8Q0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv3-3A0A140T8Q0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv3-3A0A140T8Q0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv3-3A0A140T8Q0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Igkv3-3A0A140T8Q0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv3-3A0A140T8Q0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv3-3A0A140T8Q0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Igkv3-3A0A140T8Q0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Pkd1-207ENSMUST00000228550 1050 ntBASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms