Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9d-4A0A0G2JG37 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav9d-4A0A0G2JG37 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav9d-4A0A0G2JG37 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav9d-4A0A0G2JG37 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9d-4A0A0G2JG37 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Gm5913-201ENSMUST00000119397 1399 ntBASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9d-4A0A0G2JG37 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav9d-4A0A0G2JG37 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9d-4A0A0G2JG37 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9d-4A0A0G2JG37 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Trav9d-4A0A0G2JG37 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms