Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AL157996.1-201ENST00000624684 2299 ntBASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AC018629.1-201ENST00000623381 1736 ntBASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AC022217.1-201ENST00000521069 738 ntBASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 PGAM1P5-201ENST00000548011 764 ntBASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AC021016.3-201ENST00000608367 477 ntBASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AC068587.8-201ENST00000641239 219 ntBASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.24■□□□□ 0.03
PTPN20Q4JDL3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 FAM8A2P-201ENST00000528813 1142 ntBASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN20Q4JDL3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms