Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
EFNB1P98172 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.95□□□□□ -0.34
EFNB1P98172 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.95□□□□□ -0.34
EFNB1P98172 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.95□□□□□ -0.34
EFNB1P98172 ACTG1P3-201ENST00000431775 1114 ntBASIC12.95□□□□□ -0.34
EFNB1P98172 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 UGT1A2P-201ENST00000454886 866 ntBASIC12.95□□□□□ -0.34
EFNB1P98172 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.95□□□□□ -0.34
EFNB1P98172 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.95□□□□□ -0.34
EFNB1P98172 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.95□□□□□ -0.34
EFNB1P98172 RPSAP52-203ENST00000622976 1023 ntBASIC12.95□□□□□ -0.34
EFNB1P98172 AC002472.3-201ENST00000640124 621 ntBASIC12.95□□□□□ -0.34
EFNB1P98172 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.95□□□□□ -0.34
EFNB1P98172 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.95□□□□□ -0.34
EFNB1P98172 AC007541.1-201ENST00000570282 1469 ntBASIC12.95□□□□□ -0.34
EFNB1P98172 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
EFNB1P98172 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.95□□□□□ -0.34
EFNB1P98172 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.95□□□□□ -0.34
EFNB1P98172 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.95□□□□□ -0.34
EFNB1P98172 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.95□□□□□ -0.34
EFNB1P98172 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
EFNB1P98172 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
EFNB1P98172 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 AC134312.5-201ENST00000568031 1313 ntBASIC12.94□□□□□ -0.34
EFNB1P98172 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
EFNB1P98172 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
EFNB1P98172 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB1P98172 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB1P98172 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB1P98172 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB1P98172 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB1P98172 MIR4683-201ENST00000579659 81 ntBASIC12.94□□□□□ -0.34
EFNB1P98172 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB1P98172 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB1P98172 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms