Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.32□□□□□ -0.92
Trim63Q38HM4 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC9.32□□□□□ -0.92
Trim63Q38HM4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.32□□□□□ -0.92
Trim63Q38HM4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.32□□□□□ -0.92
Trim63Q38HM4 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.32□□□□□ -0.92
Trim63Q38HM4 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gm37843-201ENSMUST00000195213 2639 ntBASIC9.32□□□□□ -0.92
Trim63Q38HM4 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 AA474408-201ENSMUST00000098110 3339 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm25287-201ENSMUST00000103846 110 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm22918-201ENSMUST00000103855 110 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm11745-201ENSMUST00000121669 448 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm27243-201ENSMUST00000183964 521 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm28630-201ENSMUST00000187806 498 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm45509-201ENSMUST00000209624 1229 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Gm13140-201ENSMUST00000119840 3151 ntBASIC9.31□□□□□ -0.92
Trim63Q38HM4 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim63Q38HM4 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm19409-201ENSMUST00000198244 2858 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms