Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ACKR1-201ENST00000368121 1240 ntBASIC13.22□□□□□ -0.29
TMEM129A0AVI4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 BAATP1-201ENST00000412284 1225 ntBASIC13.22□□□□□ -0.29
TMEM129A0AVI4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 CROCCP4-201ENST00000457096 498 ntBASIC13.22□□□□□ -0.29
TMEM129A0AVI4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 PTP4A1P2-201ENST00000546033 454 ntBASIC13.22□□□□□ -0.29
TMEM129A0AVI4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 SALL4P5-201ENST00000419001 1760 ntBASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AC007969.1-201ENST00000433675 447 ntBASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AP001889.1-201ENST00000525414 633 ntBASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AC068587.3-201ENST00000526613 355 ntBASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AC009486.1-201ENST00000569860 813 ntBASIC13.21□□□□□ -0.29
TMEM129A0AVI4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AL359881.2-201ENST00000602973 570 ntBASIC13.21□□□□□ -0.29
TMEM129A0AVI4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 PRSS30P-206ENST00000641773 873 ntBASIC13.21□□□□□ -0.29
TMEM129A0AVI4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 AC005562.1-201ENST00000583030 3219 ntBASIC13.21□□□□□ -0.29
TMEM129A0AVI4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM129A0AVI4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms