Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 CYP46A4P-201ENST00000414953 267 ntBASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 SLC25A24P2-201ENST00000415059 510 ntBASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 AC022217.1-201ENST00000521069 738 ntBASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 AC013355.1-201ENST00000562625 723 ntBASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 AC090164.2-201ENST00000611487 516 ntBASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 MIR6720-201ENST00000611664 98 ntBASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIP2Q9UDT6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AL136172.1-201ENST00000598590 1394 ntBASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 MRPL37P1-201ENST00000592451 1337 ntBASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AC012441.2-201ENST00000444843 739 ntBASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AC005962.1-201ENST00000584100 773 ntBASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 AL021578.1-201ENST00000613646 709 ntBASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 Z98259.2-201ENST00000641583 609 ntBASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIP2Q9UDT6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 MBLAC2-202ENST00000514906 1936 ntBASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 SPTLC1P5-201ENST00000450718 252 ntBASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 AC008805.1-201ENST00000590892 364 ntBASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 AL645939.5-201ENST00000606834 243 ntBASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIP2Q9UDT6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms