Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AC015818.8-201ENST00000587907 1519 ntBASIC14.35□□□□□ -0.11
NPAS2Q99743 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.34□□□□□ -0.11
NPAS2Q99743 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.34□□□□□ -0.11
NPAS2Q99743 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.34□□□□□ -0.11
NPAS2Q99743 AC093433.1-201ENST00000458048 571 ntBASIC14.34□□□□□ -0.11
NPAS2Q99743 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.34□□□□□ -0.11
NPAS2Q99743 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.34□□□□□ -0.11
NPAS2Q99743 AC068587.3-201ENST00000526613 355 ntBASIC14.34□□□□□ -0.11
NPAS2Q99743 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NPAS2Q99743 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 MIR6752-201ENST00000618442 71 ntBASIC14.34□□□□□ -0.11
NPAS2Q99743 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 AC093525.8-201ENST00000624099 1342 ntBASIC14.34□□□□□ -0.11
NPAS2Q99743 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.34□□□□□ -0.11
NPAS2Q99743 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPAS2Q99743 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPAS2Q99743 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPAS2Q99743 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NPAS2Q99743 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.33□□□□□ -0.11
NPAS2Q99743 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPAS2Q99743 AL356585.2-201ENST00000625078 2396 ntBASIC14.33□□□□□ -0.11
NPAS2Q99743 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NPAS2Q99743 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NPAS2Q99743 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPAS2Q99743 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPAS2Q99743 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPAS2Q99743 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPAS2Q99743 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
NPAS2Q99743 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NPAS2Q99743 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms