Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AC067863.1-201ENST00000494933 530 ntBASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AC104794.3-201ENST00000566840 1248 ntBASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AL390955.2-201ENST00000603032 514 ntBASIC15.14■□□□□ 0.01
CCDC25Q86WR0 MIR6074-201ENST00000612054 107 ntBASIC15.14■□□□□ 0.01
CCDC25Q86WR0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 AC007431.3-201ENST00000623221 587 ntBASIC15.14■□□□□ 0.01
CCDC25Q86WR0 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 REXO1L1P-201ENST00000379010 6598 ntBASIC15.14■□□□□ 0.01
CCDC25Q86WR0 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC25Q86WR0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 LRRC59-203ENST00000576448 1531 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AL445209.1-201ENST00000607269 3491 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 TLE1P1-201ENST00000422965 589 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 TPRX2P-201ENST00000535362 881 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC023310.3-201ENST00000557027 670 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC100756.1-201ENST00000562736 682 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC138749.3-201ENST00000567691 622 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC116165.1-201ENST00000611806 668 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AC023511.2-201ENST00000618803 211 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 AL390754.1-201ENST00000619088 582 ntBASIC15.13■□□□□ 0.01
CCDC25Q86WR0 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC25Q86WR0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms