Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 AL590440.2-201ENST00000641973 1595 ntBASIC12.32□□□□□ -0.44
COL8A2P25067 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.32□□□□□ -0.44
COL8A2P25067 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
COL8A2P25067 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.32□□□□□ -0.44
COL8A2P25067 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 IMP3P2-201ENST00000489760 475 ntBASIC12.32□□□□□ -0.44
COL8A2P25067 NUP210P1-202ENST00000504322 710 ntBASIC12.32□□□□□ -0.44
COL8A2P25067 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.32□□□□□ -0.44
COL8A2P25067 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 AC024681.1-201ENST00000521917 487 ntBASIC12.32□□□□□ -0.44
COL8A2P25067 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
COL8A2P25067 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 AC106872.11-201ENST00000605838 421 ntBASIC12.32□□□□□ -0.44
COL8A2P25067 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.32□□□□□ -0.44
COL8A2P25067 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 AL390755.1-201ENST00000623716 2027 ntBASIC12.32□□□□□ -0.44
COL8A2P25067 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COL8A2P25067 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
COL8A2P25067 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
COL8A2P25067 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.31□□□□□ -0.44
COL8A2P25067 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 RN7SL769P-201ENST00000469386 295 ntBASIC12.31□□□□□ -0.44
COL8A2P25067 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 AL161670.2-201ENST00000557650 1227 ntBASIC12.31□□□□□ -0.44
COL8A2P25067 AC105129.2-201ENST00000559536 390 ntBASIC12.31□□□□□ -0.44
COL8A2P25067 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.31□□□□□ -0.44
COL8A2P25067 RN7SL574P-201ENST00000581512 297 ntBASIC12.31□□□□□ -0.44
COL8A2P25067 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
COL8A2P25067 AC133540.1-201ENST00000620845 1019 ntBASIC12.31□□□□□ -0.44
COL8A2P25067 AC091812.3-201ENST00000621362 345 ntBASIC12.31□□□□□ -0.44
COL8A2P25067 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.31□□□□□ -0.44
COL8A2P25067 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
COL8A2P25067 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COL8A2P25067 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.31□□□□□ -0.44
COL8A2P25067 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.31□□□□□ -0.44
COL8A2P25067 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms