Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 BTBD6P1-201ENST00000412176 1267 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 MTX1P1-201ENST00000440904 838 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CNN2P10-201ENST00000443067 918 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 FTLP10-202ENST00000505798 471 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 AL391280.1-201ENST00000506969 1062 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 DUX4L47-201ENST00000566374 394 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 AC004466.1-201ENST00000599515 1080 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CLUHP2-201ENST00000426660 1303 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 KRT8P4-201ENST00000509735 1454 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 FAM8A2P-201ENST00000528813 1142 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 RN7SL713P-201ENST00000582127 302 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 PPY2P-201ENST00000582808 702 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 EEF1DP1-201ENST00000585891 896 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC243960.2-201ENST00000600996 747 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC138466.3-201ENST00000619983 221 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 DGCR9-201ENST00000609630 2415 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC136759.1-202ENST00000530858 2194 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 MBLAC2-202ENST00000514906 1936 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 AC027601.5-201ENST00000624065 2482 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms