Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 MIR663B-201ENST00000408361 115 ntBASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AL591846.1-201ENST00000451736 433 ntBASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AC104982.3-201ENST00000581995 514 ntBASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 MIR6869-201ENST00000619434 62 ntBASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AC097376.2-205ENST00000610159 5334 ntBASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AL645933.1-201ENST00000440087 609 ntBASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AC108725.1-201ENST00000495472 409 ntBASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AL928921.2-201ENST00000641325 2442 ntBASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AC136759.1-202ENST00000530858 2194 ntBASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD3Q7Z3D4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms