Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLDN12P56749 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CLDN12P56749 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CLDN12P56749 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN12P56749 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLDN12P56749 AC211486.1-202ENST00000416371 468 ntBASIC12.75□□□□□ -0.37
CLDN12P56749 NUS1P3-201ENST00000423502 862 ntBASIC12.75□□□□□ -0.37
CLDN12P56749 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.75□□□□□ -0.37
CLDN12P56749 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN12P56749 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN12P56749 AC211476.1-201ENST00000503899 468 ntBASIC12.75□□□□□ -0.37
CLDN12P56749 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 AC022616.1-201ENST00000518688 554 ntBASIC12.75□□□□□ -0.37
CLDN12P56749 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
CLDN12P56749 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 AC138761.1-201ENST00000584393 385 ntBASIC12.75□□□□□ -0.37
CLDN12P56749 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 PRSS30P-206ENST00000641773 873 ntBASIC12.75□□□□□ -0.37
CLDN12P56749 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CLDN12P56749 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CLDN12P56749 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLDN12P56749 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CLDN12P56749 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLDN12P56749 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLDN12P56749 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDN12P56749 PCDHB18P-202ENST00000526308 3197 ntBASIC12.74□□□□□ -0.37
CLDN12P56749 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CLDN12P56749 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 RNU1-114P-201ENST00000365297 166 ntBASIC12.74□□□□□ -0.37
CLDN12P56749 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN12P56749 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN12P56749 AC004945.1-201ENST00000416738 983 ntBASIC12.74□□□□□ -0.37
CLDN12P56749 CNN2P11-201ENST00000429351 262 ntBASIC12.74□□□□□ -0.37
CLDN12P56749 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN12P56749 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDN12P56749 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN12P56749 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 ZNF890P-202ENST00000530367 1156 ntBASIC12.74□□□□□ -0.37
CLDN12P56749 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN12P56749 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 AC036164.1-201ENST00000570544 333 ntBASIC12.74□□□□□ -0.37
CLDN12P56749 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.74□□□□□ -0.37
CLDN12P56749 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLDN12P56749 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN12P56749 AL662799.1-202ENST00000614205 422 ntBASIC12.74□□□□□ -0.37
CLDN12P56749 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
CLDN12P56749 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms