Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL132655.2-201ENST00000596276 594 ntBASIC15.54■□□□□ 0.08
RCCD1A6NED2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 WFDC1-204ENST00000613603 549 ntBASIC15.54■□□□□ 0.08
RCCD1A6NED2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 CU634019.7-201ENST00000624153 1185 ntBASIC15.54■□□□□ 0.08
RCCD1A6NED2 FP236241.2-201ENST00000624906 1185 ntBASIC15.54■□□□□ 0.08
RCCD1A6NED2 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 AC007541.1-201ENST00000570282 1469 ntBASIC15.53■□□□□ 0.08
RCCD1A6NED2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 FTLP10-202ENST00000505798 471 ntBASIC15.53■□□□□ 0.08
RCCD1A6NED2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 RFPL4AP1-201ENST00000530883 850 ntBASIC15.53■□□□□ 0.08
RCCD1A6NED2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 AC027237.1-201ENST00000560942 655 ntBASIC15.53■□□□□ 0.08
RCCD1A6NED2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 AL355385.1-201ENST00000606123 409 ntBASIC15.53■□□□□ 0.08
RCCD1A6NED2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCCD1A6NED2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.53■□□□□ 0.08
RCCD1A6NED2 AC073869.1-201ENST00000415574 2762 ntBASIC15.53■□□□□ 0.08
RCCD1A6NED2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 MIR497HG-202ENST00000572453 3838 ntBASIC15.52■□□□□ 0.08
RCCD1A6NED2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 API5-211ENST00000534695 560 ntTSL 5 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 WASH4P-201ENST00000564273 1246 ntBASIC15.52■□□□□ 0.08
RCCD1A6NED2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCCD1A6NED2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RCCD1A6NED2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCCD1A6NED2 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCCD1A6NED2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.52■□□□□ 0.07
RCCD1A6NED2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
RCCD1A6NED2 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms