Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 TPRX2P-201ENST00000535362 881 ntBASIC16.34■□□□□ 0.21
CBX8Q9HC52 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 AC124283.3-201ENST00000570869 594 ntBASIC16.34■□□□□ 0.21
CBX8Q9HC52 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 AC138696.2-201ENST00000607376 223 ntBASIC16.34■□□□□ 0.21
CBX8Q9HC52 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 BAP1-211ENST00000615113 489 ntBASIC16.34■□□□□ 0.21
CBX8Q9HC52 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CBX8Q9HC52 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX8Q9HC52 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CBX8Q9HC52 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.33■□□□□ 0.21
CBX8Q9HC52 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX8Q9HC52 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CBX8Q9HC52 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX8Q9HC52 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CBX8Q9HC52 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CBX8Q9HC52 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 AC025678.2-201ENST00000562061 970 ntBASIC16.33■□□□□ 0.2
CBX8Q9HC52 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX8Q9HC52 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CBX8Q9HC52 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 MARK2P9-201ENST00000430958 1727 ntBASIC16.32■□□□□ 0.2
CBX8Q9HC52 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 AC004449.1-201ENST00000564240 433 ntBASIC16.32■□□□□ 0.2
CBX8Q9HC52 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 AL445209.1-201ENST00000607269 3491 ntBASIC16.32■□□□□ 0.2
CBX8Q9HC52 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX8Q9HC52 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms