Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.32□□□□□ -0.92
Sdc1P18828 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Sdc1P18828 Gm11803-201ENSMUST00000119966 444 ntBASIC9.32□□□□□ -0.92
Sdc1P18828 Gm12502-201ENSMUST00000120197 444 ntBASIC9.32□□□□□ -0.92
Sdc1P18828 Gm12164-201ENSMUST00000121695 551 ntBASIC9.32□□□□□ -0.92
Sdc1P18828 Gm3329-201ENSMUST00000159873 556 ntBASIC9.32□□□□□ -0.92
Sdc1P18828 Mir8102-201ENSMUST00000184148 139 ntBASIC9.32□□□□□ -0.92
Sdc1P18828 Gm18893-201ENSMUST00000198416 943 ntBASIC9.32□□□□□ -0.92
Sdc1P18828 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Sdc1P18828 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.32□□□□□ -0.92
Sdc1P18828 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Sdc1P18828 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Sdc1P18828 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sdc1P18828 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.31□□□□□ -0.92
Sdc1P18828 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.31□□□□□ -0.92
Sdc1P18828 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.31□□□□□ -0.92
Sdc1P18828 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.31□□□□□ -0.92
Sdc1P18828 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm4984-201ENSMUST00000115987 360 ntBASIC9.31□□□□□ -0.92
Sdc1P18828 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm13570-201ENSMUST00000140763 309 ntBASIC9.31□□□□□ -0.92
Sdc1P18828 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm44771-201ENSMUST00000206975 626 ntBASIC9.31□□□□□ -0.92
Sdc1P18828 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.31□□□□□ -0.92
Sdc1P18828 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.31□□□□□ -0.92
Sdc1P18828 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.31□□□□□ -0.92
Sdc1P18828 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.31□□□□□ -0.92
Sdc1P18828 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sdc1P18828 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sdc1P18828 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.3□□□□□ -0.92
Sdc1P18828 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Sdc1P18828 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Sdc1P18828 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.3□□□□□ -0.92
Sdc1P18828 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sdc1P18828 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.3□□□□□ -0.92
Sdc1P18828 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Sdc1P18828 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 173.4 ms