Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.08■□□□□ 0.16
PMS1P54277 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.08■□□□□ 0.16
PMS1P54277 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 FAM90A12P-201ENST00000519497 2375 ntBASIC16.08■□□□□ 0.16
PMS1P54277 FAM90A24P-201ENST00000520792 2369 ntBASIC16.08■□□□□ 0.16
PMS1P54277 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.08■□□□□ 0.16
PMS1P54277 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PMS1P54277 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.08■□□□□ 0.16
PMS1P54277 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.08■□□□□ 0.16
PMS1P54277 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
PMS1P54277 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PMS1P54277 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PMS1P54277 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 AC079781.5-202ENST00000641784 3743 ntBASIC16.07■□□□□ 0.16
PMS1P54277 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.07■□□□□ 0.16
PMS1P54277 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PMS1P54277 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.07■□□□□ 0.16
PMS1P54277 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.07■□□□□ 0.16
PMS1P54277 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.07■□□□□ 0.16
PMS1P54277 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.07■□□□□ 0.16
PMS1P54277 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PMS1P54277 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.07■□□□□ 0.16
PMS1P54277 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.07■□□□□ 0.16
PMS1P54277 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.07■□□□□ 0.16
PMS1P54277 MIR4783-201ENST00000580343 82 ntBASIC16.07■□□□□ 0.16
PMS1P54277 PPY2P-201ENST00000582808 702 ntBASIC16.07■□□□□ 0.16
PMS1P54277 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 AC104506.1-201ENST00000609247 429 ntBASIC16.07■□□□□ 0.16
PMS1P54277 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 TUBB8P4-201ENST00000511806 1324 ntBASIC16.07■□□□□ 0.16
PMS1P54277 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 TMBIM7P-202ENST00000641474 1516 ntBASIC16.07■□□□□ 0.16
PMS1P54277 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.07■□□□□ 0.16
PMS1P54277 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.07■□□□□ 0.16
PMS1P54277 LINC02486-201ENST00000604157 3000 ntBASIC16.07■□□□□ 0.16
PMS1P54277 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMS1P54277 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.06■□□□□ 0.16
PMS1P54277 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.06■□□□□ 0.16
PMS1P54277 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.06■□□□□ 0.16
PMS1P54277 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
PMS1P54277 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PMS1P54277 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.06■□□□□ 0.16
PMS1P54277 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.06■□□□□ 0.16
PMS1P54277 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PMS1P54277 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PMS1P54277 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.06■□□□□ 0.16
PMS1P54277 PDIA3P1-201ENST00000471856 1510 ntBASIC16.06■□□□□ 0.16
PMS1P54277 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.06■□□□□ 0.16
PMS1P54277 E2F3P2-201ENST00000447755 1422 ntBASIC16.06■□□□□ 0.16
PMS1P54277 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PMS1P54277 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
PMS1P54277 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PMS1P54277 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.06■□□□□ 0.16
PMS1P54277 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.06■□□□□ 0.16
PMS1P54277 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms