Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.46□□□□□ -0.41
VAMP1P23763 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
VAMP1P23763 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
VAMP1P23763 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.46□□□□□ -0.41
VAMP1P23763 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.46□□□□□ -0.41
VAMP1P23763 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
VAMP1P23763 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.46□□□□□ -0.41
VAMP1P23763 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.46□□□□□ -0.41
VAMP1P23763 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC12.46□□□□□ -0.41
VAMP1P23763 AC004066.1-201ENST00000502488 802 ntBASIC12.46□□□□□ -0.41
VAMP1P23763 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.46□□□□□ -0.41
VAMP1P23763 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.46□□□□□ -0.41
VAMP1P23763 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.46□□□□□ -0.41
VAMP1P23763 AC092865.6-201ENST00000642101 219 ntBASIC12.46□□□□□ -0.41
VAMP1P23763 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.46□□□□□ -0.41
VAMP1P23763 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.46□□□□□ -0.41
VAMP1P23763 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.46□□□□□ -0.41
VAMP1P23763 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.46□□□□□ -0.42
VAMP1P23763 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.46□□□□□ -0.42
VAMP1P23763 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
VAMP1P23763 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VAMP1P23763 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VAMP1P23763 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.46□□□□□ -0.42
VAMP1P23763 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
VAMP1P23763 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VAMP1P23763 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.46□□□□□ -0.42
VAMP1P23763 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
VAMP1P23763 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VAMP1P23763 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VAMP1P23763 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
VAMP1P23763 AC010336.1-201ENST00000539278 4739 ntBASIC12.46□□□□□ -0.42
VAMP1P23763 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VAMP1P23763 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VAMP1P23763 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.46□□□□□ -0.42
VAMP1P23763 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
VAMP1P23763 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
VAMP1P23763 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.45□□□□□ -0.42
VAMP1P23763 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
VAMP1P23763 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 ADH5P3-201ENST00000433842 1137 ntBASIC12.45□□□□□ -0.42
VAMP1P23763 MTND6P24-201ENST00000440466 518 ntBASIC12.45□□□□□ -0.42
VAMP1P23763 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.45□□□□□ -0.42
VAMP1P23763 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 USP9YP2-201ENST00000504503 1000 ntBASIC12.45□□□□□ -0.42
VAMP1P23763 USP9YP1-201ENST00000513521 1002 ntBASIC12.45□□□□□ -0.42
VAMP1P23763 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.45□□□□□ -0.42
VAMP1P23763 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.45□□□□□ -0.42
VAMP1P23763 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.45□□□□□ -0.42
VAMP1P23763 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 AC060766.1-201ENST00000590824 627 ntBASIC12.45□□□□□ -0.42
VAMP1P23763 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.45□□□□□ -0.42
VAMP1P23763 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 AC003101.2-201ENST00000612557 442 ntBASIC12.45□□□□□ -0.42
VAMP1P23763 MIR6069-201ENST00000620069 79 ntBASIC12.45□□□□□ -0.42
VAMP1P23763 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 AC055717.3-201ENST00000622967 595 ntBASIC12.45□□□□□ -0.42
VAMP1P23763 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.45□□□□□ -0.42
VAMP1P23763 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
VAMP1P23763 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms