Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.4□□□□□ -0.9
Trim63Q38HM4 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm37160-201ENSMUST00000193081 1689 ntBASIC9.4□□□□□ -0.9
Trim63Q38HM4 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.4□□□□□ -0.9
Trim63Q38HM4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.4□□□□□ -0.9
Trim63Q38HM4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.4□□□□□ -0.9
Trim63Q38HM4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.4□□□□□ -0.9
Trim63Q38HM4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trim63Q38HM4 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim63Q38HM4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Gm37040-201ENSMUST00000191740 1824 ntBASIC9.4□□□□□ -0.91
Trim63Q38HM4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.4□□□□□ -0.91
Trim63Q38HM4 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Trim63Q38HM4 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.39□□□□□ -0.91
Trim63Q38HM4 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC9.39□□□□□ -0.91
Trim63Q38HM4 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Fam32a-201ENSMUST00000003123 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.39□□□□□ -0.91
Trim63Q38HM4 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim63Q38HM4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.39□□□□□ -0.91
Trim63Q38HM4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trim63Q38HM4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.39□□□□□ -0.91
Trim63Q38HM4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms