Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 MIR1202-201ENST00000408529 83 ntBASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 AC119751.2-201ENST00000504529 210 ntBASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 AC131206.1-201ENST00000538078 1211 ntBASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 AC006453.4-201ENST00000636949 1252 ntBASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 AL928921.2-201ENST00000641325 2442 ntBASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
SIMC1Q8NDZ2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SIMC1Q8NDZ2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SIMC1Q8NDZ2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AC006001.1-201ENST00000325130 474 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RN7SKP175-201ENST00000408472 289 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 KRT43P-201ENST00000434019 910 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RPL7P3-201ENST00000441388 714 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 ACA64.2-201ENST00000459014 129 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AP000812.2-201ENST00000538934 718 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RAB43P1-201ENST00000561790 589 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AC106886.1-201ENST00000568660 600 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 MIR4259-201ENST00000584466 101 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AC073413.1-201ENST00000603927 732 ntBASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SIMC1Q8NDZ2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms