Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC091544.8-201ENST00000619490 361 ntBASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3F3CQ6NXT2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
H3F3CQ6NXT2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
H3F3CQ6NXT2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
H3F3CQ6NXT2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AC092135.3-201ENST00000624151 1846 ntBASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AL161670.2-201ENST00000557650 1227 ntBASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AC013726.1-201ENST00000563747 2285 ntBASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 AC091951.1-201ENST00000512854 2465 ntBASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
H3F3CQ6NXT2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 AL157791.1-201ENST00000553667 1699 ntBASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 AC144522.1-201ENST00000625111 1658 ntBASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 ST20-AS1-201ENST00000560255 4223 ntBASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3F3CQ6NXT2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms