Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lbx1P52955 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lbx1P52955 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lbx1P52955 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lbx1P52955 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lbx1P52955 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lbx1P52955 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lbx1P52955 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lbx1P52955 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Lbx1P52955 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lbx1P52955 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lbx1P52955 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lbx1P52955 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lbx1P52955 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lbx1P52955 Gm12389-201ENSMUST00000117696 418 ntBASIC11.21□□□□□ -0.61
Lbx1P52955 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC11.21□□□□□ -0.61
Lbx1P52955 Gm29689-201ENSMUST00000221076 589 ntBASIC11.21□□□□□ -0.61
Lbx1P52955 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.21□□□□□ -0.61
Lbx1P52955 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lbx1P52955 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Lbx1P52955 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
Lbx1P52955 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lbx1P52955 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.21□□□□□ -0.62
Lbx1P52955 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lbx1P52955 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.21□□□□□ -0.62
Lbx1P52955 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lbx1P52955 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.21□□□□□ -0.62
Lbx1P52955 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.21□□□□□ -0.62
Lbx1P52955 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.21□□□□□ -0.62
Lbx1P52955 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lbx1P52955 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lbx1P52955 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.21□□□□□ -0.62
Lbx1P52955 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lbx1P52955 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.21□□□□□ -0.62
Lbx1P52955 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lbx1P52955 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lbx1P52955 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Lbx1P52955 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Lbx1P52955 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Lbx1P52955 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lbx1P52955 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Matn2-203ENSMUST00000226766 3252 ntBASIC11.2□□□□□ -0.62
Lbx1P52955 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Gm14395-201ENSMUST00000120494 563 ntBASIC11.2□□□□□ -0.62
Lbx1P52955 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Gm12499-201ENSMUST00000121961 546 ntBASIC11.2□□□□□ -0.62
Lbx1P52955 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.2□□□□□ -0.62
Lbx1P52955 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.2□□□□□ -0.62
Lbx1P52955 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.2□□□□□ -0.62
Lbx1P52955 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.2□□□□□ -0.62
Lbx1P52955 AL844586.1-201ENSMUST00000224297 1042 ntBASIC11.2□□□□□ -0.62
Lbx1P52955 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC11.2□□□□□ -0.62
Lbx1P52955 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lbx1P52955 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lbx1P52955 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms