Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL355994.2-201ENST00000447882 704 ntBASIC14.56□□□□□ -0.08
VARSP26640 AC022137.2-201ENST00000503482 481 ntBASIC14.56□□□□□ -0.08
VARSP26640 AC119751.2-201ENST00000504529 210 ntBASIC14.56□□□□□ -0.08
VARSP26640 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 KRT18P25-201ENST00000508931 1278 ntBASIC14.56□□□□□ -0.08
VARSP26640 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 TDH-203ENST00000531764 1110 ntBASIC14.56□□□□□ -0.08
VARSP26640 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.56□□□□□ -0.08
VARSP26640 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.56□□□□□ -0.08
VARSP26640 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.56□□□□□ -0.08
VARSP26640 AC009486.1-201ENST00000569860 813 ntBASIC14.56□□□□□ -0.08
VARSP26640 AC103810.3-201ENST00000583567 96 ntBASIC14.56□□□□□ -0.08
VARSP26640 MIR4259-201ENST00000584466 101 ntBASIC14.56□□□□□ -0.08
VARSP26640 AC107308.1-201ENST00000615897 301 ntBASIC14.56□□□□□ -0.08
VARSP26640 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.56□□□□□ -0.08
VARSP26640 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VARSP26640 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
VARSP26640 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.55□□□□□ -0.08
VARSP26640 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VARSP26640 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.55□□□□□ -0.08
VARSP26640 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
VARSP26640 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 ACTG1P3-201ENST00000431775 1114 ntBASIC14.55□□□□□ -0.08
VARSP26640 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 FO681548.1-201ENST00000455617 1132 ntBASIC14.55□□□□□ -0.08
VARSP26640 PFN1P12-201ENST00000455938 534 ntBASIC14.55□□□□□ -0.08
VARSP26640 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 AC079316.1-201ENST00000548397 411 ntBASIC14.55□□□□□ -0.08
VARSP26640 MIR5189-201ENST00000577370 114 ntBASIC14.55□□□□□ -0.08
VARSP26640 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 AC004466.1-201ENST00000599515 1080 ntBASIC14.55□□□□□ -0.08
VARSP26640 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.55□□□□□ -0.08
VARSP26640 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
VARSP26640 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 AC134312.5-201ENST00000568031 1313 ntBASIC14.55□□□□□ -0.08
VARSP26640 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.55□□□□□ -0.08
VARSP26640 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.55□□□□□ -0.08
VARSP26640 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VARSP26640 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.55□□□□□ -0.08
VARSP26640 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VARSP26640 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
VARSP26640 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
VARSP26640 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms