Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 MIR943-201ENST00000401286 94 ntBASIC12.49□□□□□ -0.41
HIST1H1DP16402 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 DNAJB3-202ENST00000449667 1266 ntBASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC023310.3-201ENST00000557027 670 ntBASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC100756.1-201ENST00000562736 682 ntBASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC138749.3-201ENST00000567691 622 ntBASIC12.49□□□□□ -0.41
HIST1H1DP16402 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC116165.1-201ENST00000611806 668 ntBASIC12.49□□□□□ -0.41
HIST1H1DP16402 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1DP16402 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1DP16402 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 AC072061.1-201ENST00000569710 2234 ntBASIC12.48□□□□□ -0.41
HIST1H1DP16402 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 MEP1AP4-201ENST00000423244 1087 ntBASIC12.48□□□□□ -0.41
HIST1H1DP16402 AP000347.1-202ENST00000435868 847 ntBASIC12.48□□□□□ -0.41
HIST1H1DP16402 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 AP001002.3-201ENST00000623482 206 ntBASIC12.48□□□□□ -0.41
HIST1H1DP16402 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 AC020658.7-201ENST00000624274 2442 ntBASIC12.48□□□□□ -0.41
HIST1H1DP16402 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1DP16402 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
HIST1H1DP16402 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms