Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.8□□□□□ -0.36
UBA52P62987 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
UBA52P62987 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.8□□□□□ -0.36
UBA52P62987 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.8□□□□□ -0.36
UBA52P62987 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.8□□□□□ -0.36
UBA52P62987 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.8□□□□□ -0.36
UBA52P62987 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.8□□□□□ -0.36
UBA52P62987 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBA52P62987 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.8□□□□□ -0.36
UBA52P62987 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBA52P62987 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.8□□□□□ -0.36
UBA52P62987 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.8□□□□□ -0.36
UBA52P62987 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.8□□□□□ -0.36
UBA52P62987 BTNL10-201ENST00000595971 695 ntBASIC12.8□□□□□ -0.36
UBA52P62987 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
UBA52P62987 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.8□□□□□ -0.36
UBA52P62987 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.8□□□□□ -0.36
UBA52P62987 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBA52P62987 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
UBA52P62987 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.8□□□□□ -0.36
UBA52P62987 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 AC131212.3-201ENST00000624087 4219 ntBASIC12.8□□□□□ -0.36
UBA52P62987 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UBA52P62987 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 FAM86MP-201ENST00000340703 885 ntBASIC12.79□□□□□ -0.36
UBA52P62987 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.79□□□□□ -0.36
UBA52P62987 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.79□□□□□ -0.36
UBA52P62987 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.79□□□□□ -0.36
UBA52P62987 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.79□□□□□ -0.36
UBA52P62987 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.79□□□□□ -0.36
UBA52P62987 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.79□□□□□ -0.36
UBA52P62987 AC036164.1-201ENST00000570544 333 ntBASIC12.79□□□□□ -0.36
UBA52P62987 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.79□□□□□ -0.36
UBA52P62987 MIR4321-201ENST00000592276 80 ntBASIC12.79□□□□□ -0.36
UBA52P62987 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
UBA52P62987 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.79□□□□□ -0.36
UBA52P62987 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms