Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk1bQ9Z2C6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Mospd4-201ENSMUST00000180618 576 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm38158-201ENSMUST00000194617 339 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm37008-201ENSMUST00000195712 319 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm10312-201ENSMUST00000078515 489 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk1bQ9Z2C6 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms