Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm19994-201ENSMUST00000217086 586 ntBASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm18065-201ENSMUST00000221395 526 ntBASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gm12502-201ENSMUST00000120197 444 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gm14999-201ENSMUST00000121039 624 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gm27682-201ENSMUST00000183930 110 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gm29127-201ENSMUST00000188304 517 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gm18893-201ENSMUST00000198416 943 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.83□□□□□ -0.68
Hmgn3Q9DCB1 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Gm16177-201ENSMUST00000120728 718 ntBASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Gm12164-201ENSMUST00000121695 551 ntBASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Gm10268-201ENSMUST00000085340 555 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms