Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 AP002414.2-201ENST00000591780 3365 ntBASIC12.66□□□□□ -0.38
CD40P25942 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.66□□□□□ -0.38
CD40P25942 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
CD40P25942 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 AC006504.5-208ENST00000588784 2401 ntBASIC12.66□□□□□ -0.38
CD40P25942 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 AC144831.1-201ENST00000573312 2656 ntBASIC12.65□□□□□ -0.38
CD40P25942 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.65□□□□□ -0.38
CD40P25942 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 CYP4F23P-201ENST00000593402 1579 ntBASIC12.65□□□□□ -0.38
CD40P25942 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CD40P25942 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 AC068418.2-201ENST00000577309 3703 ntBASIC12.65□□□□□ -0.38
CD40P25942 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.65□□□□□ -0.38
CD40P25942 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.65□□□□□ -0.38
CD40P25942 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.65□□□□□ -0.38
CD40P25942 AC245884.6-201ENST00000515672 1067 ntBASIC12.65□□□□□ -0.38
CD40P25942 AC024681.1-201ENST00000521917 487 ntBASIC12.65□□□□□ -0.38
CD40P25942 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.65□□□□□ -0.38
CD40P25942 AC090857.1-201ENST00000527400 390 ntBASIC12.65□□□□□ -0.38
CD40P25942 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.65□□□□□ -0.38
CD40P25942 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CD40P25942 AC091812.3-201ENST00000621362 345 ntBASIC12.65□□□□□ -0.38
CD40P25942 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 KHSRPP1-201ENST00000427983 1768 ntBASIC12.65□□□□□ -0.38
CD40P25942 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CD40P25942 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
CD40P25942 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 AC008132.1-202ENST00000342005 1389 ntBASIC12.65□□□□□ -0.38
CD40P25942 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CD40P25942 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.65□□□□□ -0.38
CD40P25942 AC138969.2-201ENST00000532739 9932 ntBASIC12.65□□□□□ -0.38
CD40P25942 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD40P25942 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
CD40P25942 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CD40P25942 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.64□□□□□ -0.39
CD40P25942 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.64□□□□□ -0.39
CD40P25942 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CD40P25942 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CD40P25942 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CD40P25942 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.64□□□□□ -0.39
CD40P25942 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.64□□□□□ -0.39
CD40P25942 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.64□□□□□ -0.39
CD40P25942 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms